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In order to design a
sampling strategy,, we have used the POWSIM program.
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Reade definition
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We wanted to learn the
optimum number of inds to be analyzed per population (sample), and the
optimum number of populations that are indicative of the basin. So we did 500
runs starting witrh 10 ind per sample and went all the way up to 50 ind per
sample. The power increased linearly with increased number of individuals.
Power simulations indicated that the
24 SNPs used for this study have a 90% probability of detecting
genetic differentiation if a sample size of 50 is used. But did not follow such a trend with
increased number of populations. So we settled on selecting 50 ind per 10
popualtions
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Wright fisher model without
migration or mutation
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