A

amino acids
     comparing sequences
     composition
applications
     deploying
     prototyping

B

Bioinformatics Toolbox
     computation with MATLAB
     defined
     expected user
     installation
     required software
     visualizing data

C

clusters
     gene expression data
codons
     nucleotide composition
composition
     amino acid
     nucleotide
conversions
     nucleotide to amino acid

D

data
     filtering microarray data
     getting into MATLAB
     loading into MATLAB
     microarray
data formats
     supporting functions
databases
     getting information from
     related genes
     supporting functions

E

example
     gene expression in mouse brain
     gene expression in yeast metabolism
     sequence alignment
     sequence statistics

F

features
     application deployment
     prototyping
functions
     data formats
     databases
     microarray analysis
     protein structure analysis
     sequence alignment
     sequence utilities

G

gene expression profile
     mouse brain
     yeast metabolism
genome data
     with MATLAB structures

I

installation
     from CD or Web

M

MATLAB structures
     with genome data
microarray
     clustering genes
     filtering data
     mouse brain example
     principal component analysis
     scatter plots
     spacial images
     statistics
     visualizing data
     working with data
     yeast example
microarray analysis
     supporting functions
model organism
     finding
mouse brain
     gene expression profile
     microarray tutorial

N

NCBI
     searching Web site
nucleotides
     composition in sequences
     content in sequences
     searching database

O

open reading frames
     searching for

P

plots
     scatter
principal component analysis
     filtering microarray data
protein properties
     analysis functions
protein sequence
     locating
prototyping
     supporting features

S

sequence
     amino acid conversion
     codon composition
     comparing amino acids
     nucleotide content
     protein coding
     searching database
     statistics example
sequence alignment
     example
     supporting functions
sequence analysis
     defined
sequence utilities
     supporting functions
sequences
     nucleotide composition
share algorithms
     supporting features
software
     additional
     required
spatial images
     microarray
statistics
     microarray
structures
     with genome data

V

visualizing data
     microarray