| Bioinformatics Toolbox | |
View, edit, and explore phylogenetic tree data
phytreetool(Tree) phytreetool(File)
| Tree | Phytree object created with the function phytree (phytree) or phytreeread. |
File | Newick or ClustalW tree formatted file (ASCII text file) with phylogenetic tree data. Enter a filename, a path and filename, or a URL pointing to a file. File can also be a MATLAB character array that contains the text for a Newick file. |
phytreetool is an interactive GUI that allows you to view, edit, and explore phylogenetic tree data. This GUI allows branch pruning, reordering, renaming, and distance exploring. It can also open or save Newick formatted files.
phytreetool(Tree) loads data from a phytree object in the MATLAB workspace into the GUI.
phytreetool(File) loads data from a Newick formatted file into the GUI.
tr= phytreeread('pf00002.tree')
phytreetool(tr)
Bioinformatics Toolbox functions phytreeread, phytreewrite and the phytree object methods phytree (phytree), plot (phytree), view (phytree)
| | phytreeread | phytreewrite | |
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