| Bioinformatics Toolbox | |
Read data from PIR file
PIRData = pirread('File')
pirread('String')
File | Protein Information Resource (PIR-PSD) formatted file (ASCII text file). Enter a filename, a path and filename, or a URL pointing to a file. File can also be a MATLAB character array that contains the text for a PIR-PSD file. |
String | Character string with PIR data. |
PIRData = pirread('File') reads data from a Protein Information Resource (PIR-PSD) formatted file File and creates a MATLAB structure PIRData with the following fields:
Entry EntryType Title Organism Date Accessions Reference Genetics Classification Keywords Feature Summary Sequence: [1x105 char]
pirread('String') attempts to retrieve PIR data from the string String.
For more information on the PIR-PSD database, see
http://pir.georgetown.edu
Get protein information for cytochrome C from the PIR-PSD database, save the information in the file cchu.txt, and then read the information back into MATLAB.
getpir('cchu', 'ToFile', 'cchu.txt')
pirdata = pirread('cchu.txt')
Bioinformatics Toolbox functions genpeptread, getpir, pdbread
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